Utility Modules

• Module simuOpt
  • Function setOptions
• Module simuPOP.utils
  • class Trajectory
  • class TrajectorySimulator
  • Function simulateForwardTrajectory
  • Function simulateBackwardTrajectory
  • class ProgressBar
  • Function viewVars
  • Function saveCSV
  • class Exporter
  • Function importPopulation
  • Function export
• Module simuPOP.demography
  • Function migrIslandRates
  • Function migrHierarchicalIslandRates
  • Function migrSteppingStoneRates
  • Function migrtwoDSteppingStoneRates
  • class EventBasedModel
  • class DemographicEvent
  • class ExpansionEvent
  • class ResizeEvent
  • class SplitEvent
  • class MergeEvent
  • class AdmixtureEvent
  • class InstantChangeModel
  • class ExponentialGrowthModel
  • class LinearGrowthModel
  • class MultiStageModel
  • class OutOfAfricaModel
  • class SettlementOfNewWorldModel
  • class CosiModel
• Module simuPOP.sampling
  • class BaseSampler
  • class RandomSampler
  • Function drawRandomSample
  • Function drawRandomSamples
  • class CaseControlSampler
  • Function drawCaseControlSample
  • Function drawCaseControlSamples
  • class PedigreeSampler
  • class AffectedSibpairSampler
  • Function drawAffectedSibpairSample
  • Function drawAffectedSibpairSamples
  • class NuclearFamilySampler
  • Function drawNuclearFamilySample
  • Function drawNuclearFamilySamples
  • class ThreeGenFamilySampler
  • Function drawThreeGenFamilySample
  • Function drawThreeGenFamilySamples
  • class CombinedSampler
  • Function drawCombinedSample
  • Function drawCombinedSamples
• Module simuPOP.gsl